BGSI
Human Genomic Analysis and Mycobacterium Tuberculosis in Cases of Drug-Sensitive and Drug-Resistant Pulmonary TB in Indonesia
Background
Whole genome sequencing (WGS) in tuberculosis is an alternative to the WHO probe-based method whose main function is to detect drug resistance, genetic diversity and changes in the transmission dynamics of Mycobacterium tuberculosis complex which is the cause of tuberculosis. According to research by Butov et al., (2016) showed that a group of people are susceptible to pulmonary TB M infection and become sick with pulmonary TB (5-10%) or become drug-resistant pulmonary TB. Genetic patterns that cause deficiencies in the IL-12 and IFN-γ pathways, STAT1, IL-17F polymorphisms, are thought to be more susceptible to infection and become sick with pulmonary tuberculosis. However, the contribution of this polymorphism to the course of tuberculosis is still being studied further. Based on data from the TB Sub-Directorate, 2021, it was stated that the highest estimated cases of TB were in West Java.
Therefore, a new breakthrough is needed that changes the paradigm in diagnosis and therapy. The existence of a national registry of M.Tb genome mutations obtained from WGS examinations will be big data that can be the basis for national TB treatment policies in the context of eliminating TB by 2030.
Information
This study aims to determine the mapping of the human genome and Mycobacterium tuberculosis, in cases of drug-sensitive and drug-resistant TB and to determine the resistance pattern of Mycobacterium tuberculosis by using multiple target gene sequencing to accelerate treatment according to the resistance pattern.
Type of Study
Observational Study
Topic
Tuberculosis
Collaborator
Kementerian Kesehatan Republik Indonesia